Publications

Book Chapters:

Song Huang, David Ballard, Zheyang Wu, Hongyu Zhao (2007), "Expression quantitative trait loci mapping", Current Topics in Human Genetics, Studies in Human Diseases, edited by HW Deng, H. Shen, Y-J Liu, H. Hu, 379-431.


Peer-reviewed Journal Articles:  (Underlined authors are my students.)

Dalin Tang, Chun Yang,  Pedro J. del Nido, Heng Zuo, Rahul H. Rathod, Xueying Huang, Vasu Gooty, Alexander Tang, Kristen L. Billiar, Zheyang Wu,  and Tal Geva (2015) "Mechanical stress is associated with right ventricular response to pulmonary valve replacement in patients with repaired tetralogy of fallot”, The Journal of Thoracic and Cardiovascular Surgery. In print.

Dongni Zhang, Hongzhu Cui, Dmitry Korkin, and Zheyang Wu (2015) "Incorporation of protein binding effects into likelihood ratio test for exome sequencing data". BMC Proceedings. In print.

Liang Wang, et. al. (2015) "Morphological and Stress Vulnerability Indices for Human Coronary Plaques and Their Correlations with Cap Thickness and Lipid Percent: An IVUS-Based Fluid-Structure Interaction Multi-Patient Study". PLoS Computational Biology. In print.

Elizabeth T. Cirulli, et. al. (2015) "Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways", Science. 347(6229): 1436-1441. DOI: 10.1126/science.aaa3650. (Coauthor ship as part of  FALS Sequencing Consortium). 

Liang Wang, Zheyang Wu, Chun Yang,  Jie Zheng, Richard Bach, David Muccigrosso, Kristen Billiar,  Akiko Maehara, Gary S. Mintz , and Dalin Tang (2015), "IVUS-Based FSI Models for Human Coronary Plaque Progression Study: Components, Correlation and Predictive Analysis", Annals of Biomedical Engineering. 43(1): 107-121. DOI: 10.1007/s10439-014-1118-1.

Bradley T. Smith, et. al. (2014), "Exome-wide rare variant analysis identifies TUBA4A mutations associated with familial ALS",  Neuron. 84(2):324-31. doi: 10.1016/j.neuron.2014.09.027. 

Zheyang Wu, Yiming Sun, Shiquan He, Judy Cho, Hongyu Zhao, and Jiashun Jin (2014), "Detection Boundary and Higher Criticism for Weak and Sparse Genetic Effects", The Annals of Applied Statistics. 8(2): 824–851. DOI: 10.1214/14-AOAS724. 

Marisa Mariani, Mark McHugh, Marco Petrillo, Steven Sieber, Shiquan He, Mirko Andreoli, Zheyang Wu, Paul Fiedler, Giovanni Scambia, Shohreh Shahabi, and Cristiano Ferlini (2014), "HGF/c-Met Axis Drives Cancer Aggressiveness in the Neo-adjuvant Setting of Ovarian Cancer", Oncotarget5(13):4855-67.

Marisa Mariani, Shiquan He, Mark McHugh, Mirko Andreoli, Deep Pandya, Steven Sieber, Zheyang Wu, Paul Fiedler, Shohreh Shahabi and Cristiano Ferlini (2014), "Integrated Multidimensional Analysis is Required for Accurate Prognostic Biomarkers in Colorectal Cancer", PLoS One9(7):e101065. doi: 10.1371/journal.pone.0101065.

Jing Xuan, Li Yang, Zheyang Wu (2014), "Higher Criticism Approach to Detect Rare Variants Using Whole Genome Sequencing Data", BMC Proceedings. 8(Suppl 1):S14. doi:10.1186/1753-6561-8-S1-S14.

Yiwei Liu, Jing Xuan, Zheyang Wu (2014), "Extended $T^2$ Tests for Longitudinal Family Data in Whole Genome Sequencing Studies", BMC Proceedings. 8(Suppl 1):S40. doi:10.1186/1753-6561-8-S1-S40.

Li Yang, Jing Xuan, Zheyang Wu (2014), "A Goodness-of-Fit Association Test for Whole Genome Sequencing Data", BMC Proceedings, 8(Suppl 1):S51. doi:10.1186/1753-6561-8-S1-S51.

Taoye Chen, Patchara Santawisook, Zheyang Wu (2014), "A Multi-level Model for Analysing Whole Genome Sequencing Family Data with Longitudinal Traits", BMC Proceedings. 8(Suppl 1): S86. doi:10.1186/1753-6561-8-S1-S86.

Zheyang Wu, Yijuan Hu, Phillip E. Melton (2014), "Longitudinal Data Analysis for Genetic Studies in the Whole-Genome Sequencing Era", Genetic Epidemiology. 38(S1), S74 - S80. 

Dalin Tang, Chun Yang, Gador Canton, Zheyang Wu, Thomas Hatsukami and Chun Yuan (2013), "Correlations between Carotid Plaque Progression and Mechanical Stresses Change Sign over Time: A Patient Follow Up Study Using MRI and 3D FSI Models", BioMedical Engineering. 12(105). doi:  10.1186/1475-925X-12-105. 

Jing Zhang, Zheyang Wu, Chao Gao, and Michael Q. Zhang (2012), "High-Order Interactions in Rheumatoid Arthritis Detected by Bayesian Method Using GWAS Data", The American Medical Journal. 3(1): 56-66.

Sakthikumar Ambady, Zheyang Wu and Tanja Dominko (2012) "Identification of Novel MicroRNAs in Xenopus Laevis Metaphase II Arrested Eggs", Genesis.  50: 286-299.

Zheyang Wu and Huibin Zhou (2012), "Model Selection and Sharp Asymptotic Minimaxity", Probability Theory and Related Field. DOI: 10.1007/s00440-012-0424-5. 1-27. 

Zheyang Wu and Hongyu Zhao (2011), "On Model Selection Strategies to Identify Genes Underlying Binary Traits Using Genome-Wide Association Data". Statistica Sinica. 22(3), 1041-1074.

Alun Thomas, Haley J Abel, Yanming Di, Laura L Faye, Jing Jin, Jin Liu, Zheyang Wu and Andrew Paterson (2011), "The Effect of Linkage Disequilibrium on the Identification of Functional Variants". Genetic Epidemiology. 35: S115--S119.

Zheyang Wu, Chun Yang and Dalin Tang (2011), "In Vivo Serial MRI-Based Models and Statistical Methods to Quantify Sensitivity and Specificity of Mechanical Predictors for Carotid Plaque Rupture: Location and Beyond". Journal of Biomechanical Engineering. 133(6):064503-1.

Shiquan He and Zheyang Wu (2010), "Gene-Based Higher Criticism Methods for Large Scale Exonic SNP Data".  BMC Proceedings. 5(Suppl 9):S65.

Zheyang Wu, Hongyu Zhao (2009), "Statistical Power of Model Selection Strategies for Genome-Wide Association Studies", PLoS Genetics. 5(7): e1000582. doi:10.1371/journal.pgen.1000582.

Zheyang Wu, Chatchawit Aporntewan, David Ballard, Ji Young Lee, Joon Sang Lee, and Hongyu Zhao (2009), "Two-Stage Joint Selection Method to Identify Candidate Markers from Genome-Wide Association Studies," BMC Proceedings. 3(Suppl 7):S29.

David Ballard, Chatchawit Aporntewan, Ji Young Lee, Joon Sang Lee, Zheyang Wu, and Hongyu Zhao (2009), "A Pathway Analysis Applied to GAW 16 Genome Wide Rheumatoid Arthritis Data," BMC Proceedings. 3(Suppl 7):S91.

Chatchawit Aporntewan, David Ballard, Ji Young Lee, Joon Sang Lee, Zheyang Wu, and Hongyu Zhao (2009), "Gene Hunting of the Genetic Analysis Workshop 16 Rheumatoid Arthritis Data Using Rough Set Theory", BMC Proceedings. 3(Suppl 7):S126.

Jeremiah D. Schuur, Akash Shah, Zheyang Wu, Howard Forman, and Cary P. Gross (2009), "The Impact of Medicaid Coverage and Reimbursement on Access to Diagnostic Mammography", Cancer. 115(23), 5566 - 5578.

Zhide Fang, Douglas P. Wiens, and Zheyang Wu (2006), "Locally D-optimal Designs for Multistage Models and Heteroscedastic Polynomial Regression Models", Journal of Statistical Planning and Inference. 6(11), 4059-4070.

Brian L. Weiss, Rosa Mouchotte, Rita V. M. Rio, Yi-neng Wu, Zheyang Wu, Abdelaziz Heddi, and Serap Aksoy (2006), "Interspecific Transfer of Bacterial Endosymbionts between Tsetse Fly Species: Infection Establishment and Effect on Host Fitness, Applied and Environmental Microbiology. 72(11), 7013-7021.



© Zheyang Wu 2014